Masa Awal Kemerdekaan & Orde Lama
- H.M. Rasjidi (1946)
- Fathurrahman Kafrawi (1946–1947)
- K.H. Mohammad Achmad (1947–1948)
- K.H. Masjkur (1948–1949, 1953–1955)
- K.H. A. Wahid Hasjim (1949–1952)
- Faqih Usman (1952–1953, 1955–1956)
- K.H. Muhammad Ilyas (1955–1959)
- K.H. Wahib Wahab (1959–1960)
- K.H. Saifuddin Zuhri (1962–1967) [1, 2, 3, 4]
Masa Orde Baru
- K.H. Mohammad Dachlan (1967–1971)
- K.H. Abdul Mukti Ali (1971–1978)
- H. Alamsyah Ratu Perwiranegara (1978–1983)
- H. Munawir Sjadzali (1983–1993)
- H. Tarmizi Taher (1993–1998)
- H. Muhammad Quraish Shihab (1998) [1, 2, 3, 4]
Masa Reformasi hingga Kini
H. Malik Fadjar (1998–1999)
K.H. Muhammad Tholchah Hasan (1999–2001)
H. Said Agil Husin Al Munawar (2001–2004)
H. Muhammad Maftuh Basyuni (2004–2009)
H. Suryadharma Ali (2009–2014)
H. Lukman Hakim Saifuddin (2014–2019)
H. Fachrul Razi (2019–2020)
H. Yaqut Cholil Qoumas (2020–2024)
H. Nasaruddin Umar (2024–sekarang)
